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Thibaut Jombart

Imperial College London
Lecturer
London

https://sites.google.com/site/thibautjombart/

About me
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Biostatistician working on disease outbreak response, pathogen population genetics, phylogenetics, and some random other things; R developer of adegenet, adephylo, apex, bmmix, dibbler, geoGraph, outbreaker(2), treescape, vimes, and a few more shameful projects (OutbreakTools, phylobase); organiser of the Hackout series (hackathons for outbreak analysis).

Talk to me about...
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Any of the above, brexit, meekats, or the next album release by The Brood.

Links
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github: https://github.com/thibautjombart
twitter: https://twitter.com/teebzr

1:00pm PDT

Extracting data from the web APIs and beyond (Part 1) Campbell Rehearsal Hall

4:00pm PDT

Short Break McCaw Hall

4:15pm PDT

What's up with the R consortium? McCaw Hall

4:40pm PDT

Presentation of the Women in R task force McCaw Hall

5:00pm PDT

R-Ladies Presentation 1 McCaw Hall

5:10pm PDT

R-Ladies Presentation 2 McCaw Hall

5:20pm PDT

Discussion McCaw Hall

10:30am PDT

Using Spark with Shiny and R Markdown SIEPR 130

10:48am PDT

RcppParallel: A Toolkit for Portable, High-Performance Algorithms SIEPR 130

1:00pm PDT

Linking htmlwidgets with crosstalk and mobservable McCaw Hall

1:18pm PDT

htmlwidgets: Power of JavaScript in R Lane & Lyons & Lodato

1:36pm PDT

What can R learn from Julia Lane & Lyons & Lodato

1:54pm PDT

Statistics and R in Forensic Genetics McCaw Hall

2:30pm PDT

mvarVis: An R package for Visualization of Multivariate Analysis Results Sponsor Pavilion Sequence Analysis with Package TraMineR Sponsor Pavilion Urban Mobility Modeling using R and Big Data from Mobile Phones Sponsor Pavilion

3:30pm PDT

Literate Programming McCaw Hall

4:45pm PDT

Covr: Bringing Code Coverage to R Econ 140

5:03pm PDT

'AF' a new package for estimating the attributable fraction McCaw Hall

5:21pm PDT

Data validation infrastructure: the validate package Barnes & McDowell & Cranston Using Shiny modules to build more-complex and more-manageable apps Lane & Lyons & Lodato

5:39pm PDT

A Future for R Econ 140

6:30pm PDT

Welcome Reception Bing Concert Hall

9:00am PDT

Towards a grammar of interactive graphics McCaw Hall

11:06am PDT

On the emergence of R as a platform for emergency outbreak response McCaw Hall

11:24am PDT

The phangorn package: estimating and comparing phylogenetic trees Lane & Lyons & Lodato

11:42am PDT

Phylogenetically informed analysis of microbiome data using adaptive gPCA in R Barnes & McDowell & Cranston

1:00pm PDT

R markdown: Lifesaver or death trap? McCaw Hall

1:18pm PDT

Tools for Robust R Packages SIEPR 130

1:36pm PDT

GNU make for reproducible data analysis using R and other statistical software Barnes & McDowell & Cranston

1:54pm PDT

Checkmate: Fast and Versatile Argument Checks SIEPR 130

4:30pm PDT

Cruise & Conference Dinner McCaw Hall

9:00am PDT

Statistical Thinking in a Data Science Course McCaw Hall

10:00am PDT

Coffee Break w/ Poster Exhibits McCaw Hall

10:30am PDT

Shiny Gadgets: Interactive tools for Programming and Data Analysis McCaw Hall

10:48am PDT

Practical tools for exploratory web graphics SIEPR 130

11:42am PDT

Using Jupyter notebooks with R in the classroom Barnes & McDowell & Cranston

1:00pm PDT

Catching up with Rstudio Lane & Lyons & Lodato

1:20pm PDT

shinyjs: Easily improve UX in your Shiny apps without having to learn JavaScript SIEPR 130

3:00pm PDT

Closing Remarks McCaw Hall